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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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1159 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AAAS
ENSSSCG00000000268
ENSG00000094914
Aladin WD repeat nucleoporin
Low tissue specificity
Detected in all
AAED1
ENSSSCG00000011169
ENSG00000158122
AhpC/TSA antioxidant enzyme domain containing 1
Low tissue specificity
Detected in all
AASDH
ENSSSCG00000027403
ENSG00000157426
Aminoadipate-semialdehyde dehydrogenase
Low tissue specificity
Detected in all
ABCG8
ENSSSCG00000008453
ENSG00000143921
ATP binding cassette subfamily G member 8
Low tissue specificity
Detected in all
ABHD1
ENSSSCG00000008554
ENSG00000143994
Abhydrolase domain containing 1
Low tissue specificity
Detected in all
ACER1
ENSSSCG00000023969
ENSG00000167769
Alkaline ceramidase 1
Low tissue specificity
Detected in all
ADAM7
ENSSSCG00000009646
ENSG00000069206
ADAM metallopeptidase domain 7
Tissue enriched
Detected in many
epididymis:
248.0
ADAT2
ENSSSCG00000039598
ENSG00000189007
Adenosine deaminase, tRNA specific 2
Low tissue specificity
Detected in all
ADGRF1
ENSSSCG00000001726
ENSG00000153292
Adhesion G-protein coupled receptor F1 precursor
Tissue enhanced
Detected in all
male glands:
54.4
ADGRF2
ENSSSCG00000023591
ENSG00000164393
Adhesion G protein-coupled receptor F2
Low tissue specificity
Detected in all
ADGRG3
ENSSSCG00000002814
ENSG00000182885
Adhesion G protein-coupled receptor G3
Low tissue specificity
Detected in all
AHSP
ENSSSCG00000037878
ENSG00000169877
Alpha hemoglobin stabilizing protein
Tissue enhanced
Detected in all
dura mater:
33.0
AIF1
ENSSSCG00000032341
ENSG00000204472
Allograft inflammatory factor 1
Low tissue specificity
Detected in all
AK6
ENSSSCG00000037053
ENSG00000085231
Adenylate kinase 6
Low tissue specificity
Detected in all
AKIP1
ENSSSCG00000033335
ENSG00000166452
A-kinase interacting protein 1
Low tissue specificity
Detected in all
ALG11
ENSSSCG00000009381
ENSG00000253710
ALG11, alpha-1,2-mannosyltransferase
Low tissue specificity
Detected in all
ALKAL1
ENSSSCG00000033922
ENSG00000196711
ALK and LTK ligand 1
Low tissue specificity
Detected in all
ANAPC4
ENSSSCG00000025902
ENSG00000053900
Anaphase promoting complex subunit 4
Low tissue specificity
Detected in all
ANGPTL5
ENSSSCG00000014978
ENSG00000187151
Angiopoietin like 5
Tissue enhanced
Detected in all
dura mater:
19.4
ANXA9
ENSSSCG00000006643
ENSG00000143412
Annexin A9
Low tissue specificity
Detected in all
AREG
ENSSSCG00000008963
ENSG00000109321
Amphiregulin precursor
Tissue enhanced
Detected in all
ovary:
33.6
ARL11
ENSSSCG00000036810
ENSG00000152213
ADP ribosylation factor like GTPase 11
Low tissue specificity
Detected in all
ARL6
ENSSSCG00000027278
ENSG00000113966
ADP ribosylation factor like GTPase 6
Low tissue specificity
Detected in all
ARSA
ENSSSCG00000032428
ENSG00000100299
Arylsulfatase A precursor
Low tissue specificity
Detected in all
ASTE1
ENSSSCG00000011182
ENSG00000034533
Asteroid homolog 1
Low tissue specificity
Detected in all
ATP12A
ENSSSCG00000022638
ENSG00000075673
ATPase H+/K+ transporting non-gastric alpha2 subunit
Tissue enhanced
Detected in all
upper respiratory system:
30.7
ATP6V1G3
ENSSSCG00000036270
ENSG00000151418
ATPase H+ transporting V1 subunit G3
Low tissue specificity
Detected in all
AUNIP
ENSSSCG00000003552
ENSG00000127423
Aurora kinase A and ninein interacting protein
Low tissue specificity
Detected in all
AVPR1A
ENSSSCG00000033383
ENSG00000166148
Arginine vasopressin receptor 1A
Tissue enriched
Detected in all
adrenal gland:
79.8
AVPR1B
ENSSSCG00000015639
ENSG00000198049
Arginine vasopressin receptor 1B
Tissue enriched
Detected in all
pituitary gland:
30.1
B4GALT7
ENSSSCG00000014035
ENSG00000027847
Beta-1,4-galactosyltransferase 7
Low tissue specificity
Detected in all
BAMBI
ENSSSCG00000011014
ENSG00000095739
BMP and activin membrane-bound inhibitor homolog precursor
Low tissue specificity
Detected in all
BBS12
ENSSSCG00000026290
ENSG00000181004
Bardet-Biedl syndrome 12
Low tissue specificity
Detected in all
BCDIN3D
ENSSSCG00000040144
ENSG00000186666
BCDIN3 domain containing RNA methyltransferase
Low tissue specificity
Detected in all
BCL2A1
ENSSSCG00000040010
ENSG00000140379
Bcl-2-related protein A1
Low tissue specificity
Detected in all
BDH2
ENSSSCG00000022282
ENSG00000164039
3-hydroxybutyrate dehydrogenase 2
Low tissue specificity
Detected in all
BMX
ENSSSCG00000012137
ENSG00000102010
BMX non-receptor tyrosine kinase
Low tissue specificity
Detected in all
BRS3
ENSSSCG00000036703
ENSG00000102239
Bombesin receptor subtype 3
Low tissue specificity
Detected in all
BTN1A1
ENSSSCG00000001132
ENSG00000124557
Butyrophilin subfamily 1 member A1
Low tissue specificity
Detected in all
C10orf76
ENSSSCG00000010571
ENSG00000120029
Chromosome 10 open reading frame 76
Low tissue specificity
Detected in all
C10orf82
ENSSSCG00000034237
ENSG00000165863
Chromosome 10 open reading frame 82
Low tissue specificity
Detected in all
C12orf43
ENSSSCG00000024329
ENSG00000157895
Chromosome 12 open reading frame 43
Low tissue specificity
Detected in all
C12orf45
ENSSSCG00000027792
ENSG00000151131
Uncharacterized protein C12orf45 homolog
Low tissue specificity
Detected in all
C15orf41
ENSSSCG00000026900
ENSG00000186073
Chromosome 15 open reading frame 41
Low tissue specificity
Detected in all
C16orf91
ENSSSCG00000038882
ENSG00000174109
Chromosome 16 open reading frame 91
Low tissue specificity
Detected in all
C17orf78
ENSSSCG00000017696
ENSG00000278505
Chromosome 17 open reading frame 78
Low tissue specificity
Detected in all
C2orf80
ENSSSCG00000032040
ENSG00000188674
Chromosome 2 open reading frame 80
Low tissue specificity
Detected in all
C4orf47
ENSSSCG00000015794
ENSG00000205129
UPF0602 protein C4orf47 homolog
Low tissue specificity
Detected in all
C6orf52
ENSSSCG00000001040
ENSG00000137434
Chromosome 6 open reading frame 52
Low tissue specificity
Detected in all
C6orf58
ENSSSCG00000004212
ENSG00000184530
Chromosome 6 open reading frame 58
Tissue enhanced
Detected in many
esophagus:
34.2
upper respiratory system:
15.1
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